BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C10LP1|AL428880
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 694 0.0
>3x_Contig1105
Length = 3123
Score = 694 bits (350), Expect = 0.0
Identities = 359/362 (99%)
Strand = Plus / Plus
Query: 508 atacacatggttcatcaaatcctttaggtgttacaggtaatttagatagattaccaatgc 567
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 2 atacacatggttcatcaaatcctttaggttttacaggtaaattagatagattaccaatgc 61
Query: 568 atggttactttatttttaaagatttaattactgtatttgtattcttattcttcttctcat 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 62 atggttactttatttttaaagatttaattactgtatttgtattcttattcttcttctctt 121
Query: 628 tatttgtattcttctcacctaatacaatgggacatccagataactatattcctggtaatc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tatttgtattcttctcacctaatacaatgggacatccagataactatattcctggtaatc 181
Query: 688 cattagttacacctgcatctattgtaccagaatgatatttattaccattctatgcaattt 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cattagttacacctgcatctattgtaccagaatgatatttattaccattctatgcaattt 241
Query: 748 taagatcagtacctgataaattattaggagtattagctatgtttggtgctattttaattt 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taagatcagtacctgataaattattaggagtattagctatgtttggtgctattttaattt 301
Query: 808 tattagtattacctattacagatagaagtgttattagaggtaacgcatttaaagtattct 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tattagtattacctattacagatagaagtgttattagaggtaacgcatttaaagtattct 361
Query: 868 ct 869
||
Sbjct: 362 ct 363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8213
Number of Sequences: 1807
Number of extensions: 8213
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)